I think maybe no matter how one documents a software project, it's the experience that counts more... for example, I was just reflecting on how I moved the store code to use native PHP sessions. This brought to mind how sessions work in the store and the changes that happened; all of that I experienced because I did it. To convey that in words on a web page or a piece of paper somehow omits something. The essence, or perhaps the Quality of it, in the "Zen And The Art Of Motorcycle Maintainence" sense.
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If you're a C programmer with some spare time, take a look at the mod_virgule project page and help us with one of the tasks on the ToDo list!