31 Jan 2011 mbanck   » (Journeyer)

Debian Med Bioinformatics Sprint

Last weekend, I was at the Debian Med Meeting in Travemünde near Lübeck, thanks to an invitation by Steffen Möller and Andreas Tille.

It was a great opportunity to finally meet Steffen and some of the other bioinformatics people in Debian like Manuel Prinz face-to-face for the first time. Also, lots of upstream and related bioinformatics packagers from e.g. Biolinux were present as well, many of them from the UK.

I discussed with and helped some people about Debian packaging. There is a big push to get Debian packages done and integrated in Debian and Ubuntu, but often enough people are not exactly sure what the requirements are and what needs to be done. Hopefully, the sprint was successful to clear things up and move forward.

I also managed to finalize the initial Jmol packaging and uploaded it to Debian towards the end of the sprint. I plan to update the other bioinformatics related packages in debichem like pymol and openbabel as soon as squeeze is released.

Overall, it was a great weekend, many thanks to NERC and Debian for making it possible, and to Steffen Möller for organizing it!

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